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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015815963.1_cds_XP_016498572.1_12584
CDS Infomation

[gene=LOC107817285] [db_xref=GeneID:107817285] [protein=histone deacetylase 2 isoform X2] [protein_id=XP_016498572.1] [location=complement(join(34984..35087,35195..35282,36974..37060,38071..38121,38200..38244,38451..38497,38574..38638,38736..38902,41398..41460,42393..42510,44283..44338,44448..44546))] [gbkey=CDS]
Sequence

ATGTCGACAGCATCTTCATCCAAAACCGACGACGCCGAAGCTCTACGTCGGCATCGTATT
CTCTCTAGCAAGCTGTATTTGGATGTGCCTCCTTCTAAGGTTCCGTTGATATACTCGTCA
TCCTATGACATTTCTTTTCTCGGTATTGAGAAACTGCATCCATTTGACGCTTCAAAATGG
GGTCGAATCTGCCGGTTTCTCTCTAAGAACGGTATCGTGGATCAAAAGCATATAGTTGAG
CCTGTGGAGGCAACAAAAGATGATCTGCTAGTGGTGCATTCAGAATCATACTTGAAAAGT
TTGAATAGCAGCTTGAATGTCTCCAAGATTGTTGAGGTGGGAGGAACAATCGTGGCTGCA
AAGCTTGCAAAAGAACGAGGATGGGCTATTAATGTTGGTGGTGGATTTCATCATTGTTCA
TCAGAGAGGGGAGGCGGTTTTTGTGTTTATGCTGATATATCTCTTTGTATACATTTTGCA
TTTGTGCATTTAAATATCTCAAGAGTCATGATAATCGACCTTGATGCACACCAAGGAAAT
GGCCATGAAATGGACTTCTCCGAGGACAGAAGAGTCTTTATCCTTGATATGTACAATCCT
GGAATTTATCCACTTGATTTTGAAGCCAGGCGGTACATTGATCTAGGAGTCGAAGTTCAG
AGTGGGACTGCAACAGATGAATACTTGACTAAGCTAGATCATGCACTTGAGGTTGCAGAG
AAGAAATTTGATCCCGATTTTGTTGTCTATAATGCTGGCACTGATATTTTGGATGGGGAT
CCACTTGGCAGGTTGAAGATCAGTCCTGATGGCATTGCTAGTAGGGACGAAAAGGTTTTC
AGGTTTGCTAGAGAGAGAAACATCCCCCTCATCATGCTCACATCAGGCGGTTACATGAAA
TCCAGTGCCAGAGTTATTGCTGATTCAATCATAAATCTCTCTGAGAAATCCCTTATAGAC
ATGAAAAGTTTACCAGCTGGAAAAGCATAG

Peptide Sequence

PEP ID

XP_016498572.1
PEP Infomation

PREDICTED: histone deacetylase 2 isoform X2 [Nicotiana tabacum]
Sequence

MSTASSSKTDDAEALRRHRILSSKLYLDVPPSKVPLIYSSSYDISFLGIEKLHPFDASKW
GRICRFLSKNGIVDQKHIVEPVEATKDDLLVVHSESYLKSLNSSLNVSKIVEVGGTIVAA
KLAKERGWAINVGGGFHHCSSERGGGFCVYADISLCIHFAFVHLNISRVMIIDLDAHQGN
GHEMDFSEDRRVFILDMYNPGIYPLDFEARRYIDLGVEVQSGTATDEYLTKLDHALEVAE
KKFDPDFVVYNAGTDILDGDPLGRLKISPDGIASRDEKVFRFARERNIPLIMLTSGGYMK
SSARVIADSIINLSEKSLIDMKSLPAGKA

Transcript Sequence

Gene sequence data has not been registered.